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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs76730959 chr6:88138102 A/G 1.62E-7 223 14.7 13.23 5.53 KM Plot
CESC rs77120407 chr1:40371303 C/T 1.37E-6 219 13.93 20.52 8.4 KM Plot
CESC rs77727362 chr17:28993236 C/T 0 221 14.27 9.83 1.23 KM Plot
CESC rs78489475 chr6:88120994 C/G 1.99E-7 221 14.48 13 5.53 KM Plot
CESC rs78629091 chr7:66809439 G/A 2.25E-6 217 13.45 21.2 3.22 KM Plot
CESC rs78715709 chr22:42984908 C/T 1.45E-5 220 14.8 13.63 5 KM Plot
CESC rs78946723 chr17:29015094 T/C 0 223 14.18 10.2 1.23 KM Plot
CESC rs79034696 chr3:182851057 G/A 4.01E-7 217 14.48 8.4 10.88 KM Plot
CESC rs79540048 chr1:40313107 G/A 3.48E-5 224 14.27 9.47 8.4 KM Plot
CESC rs831531 chr2:74112970 A/G 1.02E-7 221 5.53 22.38 13.78 KM Plot
CESC rs9573890 chr13:77184408 A/G 3.89E-14 224 3.33 31.83 10.98 KM Plot
CESC rs9621715 chr22:21942007 G/A 5.52E-5 224 15.7 12.83 7.57 KM Plot
CESC rs9915139 chr17:29158515 A/G 0 224 14.27 10.2 1.23 KM Plot
CHOL rs10012336 chr4:30635225 T/C 0.000101 19 23.63 38.43 0 KM Plot
CHOL rs10023112 chr4:30635635 A/G 0.000101 19 23.63 38.43 0 KM Plot